Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs11710037 | chr3:49675334 | C/G | 0.000625 | 213 | 13.73 | 16.93 | 25.33 | KM Plot |
| KIRP | rs11710065 | chr3:99996478 | T/C | 1.39E-5 | 212 | 16.47 | 19.3 | 3.85 | KM Plot |
| KIRP | rs11718165 | chr3:49696797 | A/G | 0.000366 | 214 | 13.73 | 16.93 | 23.63 | KM Plot |
| KIRP | rs11720443 | chr3:190150339 | C/T | 0.00011 | 211 | 13.97 | 19.5 | 12.1 | KM Plot |
| KIRP | rs117269825 | chr11:34791095 | C/A | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs11734460 | chr4:705074 | C/T | 0.000186 | 206 | 14.68 | 20.4 | 15.07 | KM Plot |
| KIRP | rs11741569 | chr5:81325910 | C/G | 7.18E-9 | 214 | 4.07 | 13.6 | 16.5 | KM Plot |
| KIRP | rs117454726 | chr11:34919068 | G/C | 0 | 213 | 15.88 | 17 | 3.83 | KM Plot |
| KIRP | rs11747683 | chr5:81556268 | A/C | 6.58E-9 | 214 | 16.5 | 13.03 | 6.7 | KM Plot |
| KIRP | rs117648263 | chr15:24508407 | C/T | 6.5E-5 | 209 | 17.02 | 14.8 | 10.23 | KM Plot |
| KIRP | rs117648914 | chr15:24504725 | C/A | 0.000265 | 203 | 16.97 | 13.17 | 9.48 | KM Plot |
| KIRP | rs11765093 | chr7:45226460 | T/C | 0.0003 | 212 | 15.33 | 19.27 | 9.43 | KM Plot |
| KIRP | rs117754963 | chr11:13151635 | C/T | 8.73E-6 | 212 | 16.43 | 17.02 | 3.53 | KM Plot |
| KIRP | rs117861180 | chr11:34901315 | C/T | 0 | 214 | 15.33 | 17 | 3.83 | KM Plot |
| KIRP | rs11808528 | chr1:95269997 | A/G | 4.68E-6 | 214 | 13.17 | 14.83 | 16.48 | KM Plot |